From the bioRxiv: A Selection of Recently Posted Papers from SCGB Investigators and Others
A small-correlation expansion to quantify information in noisy sensory systems
Gabriel Mahuas, Olivier Marre, Thierry Mora, and Ulisse Ferrari
bioRxiv posted 1 December 2022
A chromatic feature detector in the retina signals visual context changes
Larissa Hoefling, Klaudia P Szatko, Christian Behrens, Yongrong Qiu, David Alexander Klindt, Zachary Jessen, Gregory S Schwartz, Matthias Bethge, Philipp Berens, Katrin Franke, Alexander S Ecker, and Thomas Euler
bioRxiv posted 1 December 2022
Latent neural population dynamics underlying normal breathing, opioid induced respiratory depression, and gasping
Nicholas E Bush and Jan-Marino Ramirez
bioRxiv posted 1 December 2022
Visual Input Dynamically Changes Responses to Spatiotemporal Tactile Input Patterns in S1 Neurons
Sofie Skarup Kristensen and Henrik Jorntell
bioRxiv posted 1 December 2022
Vector-valued dopamine improves learning of continuous outputs in the striatum
Emil Waernberg and Arvind Kumar
bioRxiv posted 1 December 2022
Filter-based models of suppression in retinal ganglion cells: comparison and generalization across species and stimuli
Neda Shahidi, Fernando Rozenblit, Mohammad H. Khani, Helene M. Schreyer, Matthias Mietsch, Dario A. Protti, and Tim Gollisch
bioRxiv posted 1 December 2022
Adult neurogenesis improves spatial information encoding in the mouse hippocampus
Agustina Frechou, Sunaina S. Martin, Kelsey D. McDermott, Solen Gokhan, Wolfgang Tome, Ruben Coen-Cagli, and J. Tiago Goncalves
bioRxiv posted 1 December 2022
Hippocampal engram networks for fear memory recruit new synapses and modify pre-existing synapses in vivo.
Chaery Lee, Byung Hun Lee, Hyunsu Jung, Chiwoo Lee, Yongmin Sung, Hyopil Kim, Jooyoung Kim, Jae Youn Shim, Ji-il Kim, Dong Il Choi, Hye Yoon Park, and Bong-Kiun Kaang
bioRxiv posted 1 December 2022
Behavioral encoding across timescales by region-specific dopamine dynamics
Søren Heide Jørgensen, Aske L Ejdrup, Matthew Domenic Lycas, Leonie Pauline Posselt, Kenneth Lindegaard Madsen, Lin Tian, Jakob Kisbye Dreyer, Freja Herborg, Andreas Toft Sørensen, and Ulrik Gether
bioRxiv posted 6 December 2022
Prior expectation enhances sensorimotor behavior by modulating population tuning and subspace activity in the sensory cortex
JeongJun Park, Seolmin Kim, HyungGoo R Kim, and Joonyeol Lee
bioRxiv posted 5 December 2022
Stimulus information guides the emergence of behavior related signals in primary somatosensory cortex during learning
Mariangela Panniello, Colleen J Gillon, Roberto Maffulli, Marco Celotto, Stefano Panzeri, Blake A Richards, and Michael M Kohl
bioRxiv posted 5 December 2022
Dynamic organization of cerebellar climbing fiber response and synchrony in multiple functional modules reduces dimensions for reinforcement learning
Huu Hoang, Shinichiro Tsutsumi, Masanori Matsuzaki, Masanobu Kano, Mitsuo Kawato, Kazuo Kitamura, and Keisuke Toyama
bioRxiv posted 5 December 2022
Predicting distributed working memory activity in a large-scale mouse brain: the importance of the cell type-specific connectome
Xingyu Ding, Sean Froudist-Walsh, Jorge Jaramillo, Junjie Jiang, and Xiao-Jing Wang
bioRxiv posted 7 December 2022
Representations of tactile object location in the retrosplenial cortex
Andreas Sigstad Lande and Koen Vervaeke
bioRxiv posted 6 December 2022
Role of interneuron subtypes in controlling trial-by-trial output variability in theneocortex
Lihao Guo and Arvind Kumar
bioRxiv posted 6 December 2022
A thermodynamical model of non-deterministic computation in cortical neural networks
Elizabeth A Stoll
bioRxiv posted 7 December 2022
The mechanics underpinning non-deterministic computation in cortical neural networks
Elizabeth A Stoll
bioRxiv posted 7 December 2022
Mega-scale movie-fields in the mouse visuo-hippocampal network
Chinmay S. Purandare and Mayank R. Mehta
bioRxiv posted 8 December 2022
Abstract deliberation by visuomotor neurons in prefrontal cortex
Julie Ann Charlton and Robbe Goris
bioRxiv posted 7 December 2022
Inductive biases of neural networks for generalization in spatial navigation
Ruiyi Zhang, Xaq Pitkow, and Dora E Angelaki
bioRxiv posted 7 December 2022
Modeling electron interference at the neuronal membrane yields a holographic projection of representative information content
Elizabeth A Stoll
bioRxiv posted 7 December 2022
Optogenetic activation of visual thalamus generates artificial visual percepts
Jing Wang, Hamid Azimi, Yilei Zhao, Melanie Kaeser, Pilar Vaca Sánchez, Michael Harvey, and Gregor Rainer
bioRxiv posted 8 December 2022
Adult born hippocampal granule cells promote pattern separation by bidirectionally modulating the remapping of place and cue cells.
Sebnem Nur Tuncdemir, Andres D. Grosmark, Hannah Chung, Victor M. Luna, Clay O. Lacefield, Attila Losonczy, and Rene Hen
bioRxiv posted 8 December 2022
BCI learning phenomena can be explained by gradient-based optimization
Peter C Humphreys, Kayvon Daie, Karel Svoboda, Matthew Botvinick, and Timothy P Lillicrap
bioRxiv posted 15 December 2022
Theory of systems memory consolidation via recall-gated plasticity
Jack Lindsey and Ashok Litwin-Kumar
bioRxiv posted 10 December 2022
Two types of locus coeruleus norepinephrine neurons drive reinforcement learning
Zhixiao Su and Jeremiah Y. Cohen
bioRxiv posted 9 December 2022
Inhibitory stabilized network behaviour in a balanced neural mass model of a cortical column
Parvin Zarei Eskikand, Artemio Soto-Breceda, Mark J. Cook, Anthony Burkitt, and David B. Grayden
bioRxiv posted 9 December 2022
Abstraction of reward context facilitates relative reward coding in dorsal and ventral anterior cingulate cortex
Jonathan Chien, Joni D. Wallis, and Erin L. Rich
bioRxiv posted 11 December 2022
Interactive auditory task reveals complex sensory-action integration in mouse primary auditory cortex
Ji Liu and Patrick O Kanold
bioRxiv posted 13 December 2022
Computational mechanisms underlying thalamic regulation of prefrontal signal-to-noise ratio in decision making
Xiaohan Zhang, Michael M Halassa, and Zhe S Chen
bioRxiv posted 13 December 2022
Vector production via mental navigation in the entorhinal cortex
Sujaya Neupane, Ila R Fiete, and Mehrdad Jazayeri
bioRxiv posted 15 December 2022
Emergence of a time-independent population code in auditory cortex enables sound categorization and discrimination learning
Sophie Bagur, Jacques Bourg, Alexandre Kempf, Thibault Tarpin, Khalil Bergaoui, Yin Guo, Sebastian Ceballo, Joanna Schwenkgrub, Jean-Luc Puel, Jerome Bourien, and Brice Bathellier
bioRxiv posted 15 December 2022
Parahippocampal neurons encode task-relevant information for goal-directed navigation
Alexander Gonzalez and Lisa M Giocomo
bioRxiv posted 15 December 2022
Direct neural perturbations reveal a dynamical mechanism for robust computation
Daniel J O’Shea, Lea Duncker, Werapong Goo, Xulu Sun, Saurabh Vyas, Eric M Trautmann, Ilka Diester, Charu Ramakrishnan, Karl Deisseroth, Maneesh Sahani, and Krishna V Shenoy
bioRxiv posted 16 December 2022
Cortical Reactivation of Non-Spatial and Spatial Memory Representations Coordinate with Hippocampus to Form a Memory Dialogue
HaoRan Chang, Ingrid M. Esteves, Adam R. Neumann, Majid H. Mohajerani, and Bruce L. McNaughton
bioRxiv posted 16 December 2022
Inhibition stabilization and paradoxical effects in recurrent neural networks with short-term plasticity
Yue Kris Wu and Julijana Gjorgjieva
bioRxiv posted 19 December 2022
Distinct spatial maps and multiple object codes in the lateral entorhinal cortex
Xu Huang, Magdalene Isabell Schlesiger, Isabel Barriuso-Ortega, Christian Leibold, Duncan Archibald Allan MacLaren, Nina Bieber, and Hannah Monyer
bioRxiv posted 19 December 2022
Dynamics and maintenance of categorical responses in primary auditory cortex during task engagement
Rupesh Kumar, Srdjan Ostojic, Shihab Shamma, and Yves Boubenec
bioRxiv posted 20 December 2022
The cortico-thalamic loop attunes competitive lateral interactions across retinotopic and orientation preference maps
Domenico Giulio Guarino, Andrew P. Davison, Yves Frégnac, and Ján Antolík
bioRxiv posted 20 December 2022
Spatial Evolution of Information Dynamics in the Primary Motor Cortex During Reach
Wei Liang, Vasileios Papadourakis, and Nicholas Hatsopoulos
bioRxiv posted 23 December 2022
Independent inhibitory control mechanisms for aggressive motivation and action
Tomohito Minakuchi, Eartha Mae Guthman, Preeta Acharya, Justin Hinson, Weston Fleming, Ilana Witten, Stefan Oline, and Annegret Lea Falkner
bioRxiv posted 26 December 2022
Astroglial mediation of fast-acting antidepressant effect in zebrafish
Marc Duque, Alex B. Chen, Sujatha Narayan, David E. Olson, Mark C Fishman, Florian Engert, and Misha B Ahrens
bioRxiv posted 29 December 2022
The cost of multiplexing: PFC integrates multiple sources of information in non-orthogonal components accounting for behavioral variability
Julian Luis Amengual Roig, Fabio Di Bello, Sameh Ben Hadj Hassen, Elaine Astrand, and Suliann Ben Hamed
bioRxiv posted 29 December 2022
Ventral pallidal GABAergic neuron calcium activity encodes cue-driven reward-seeking and persists in the absence of reward delivery
Alexandra Scott, Dakota Palmer, Christelle A Cayton, Iris Lin, and Jocelyn M Richard
bioRxiv posted 31 December 2022
A Sensory-Motor Theory of the Neocortex based on Active Predictive Coding
Rajesh P. N. Rao
bioRxiv posted 31 December 2022
