From the bioRxiv: A Selection of Recently Posted Papers from SCGB Investigators and Others

Each month, SCGB scans the bioRxiv and arXiv for interesting papers from the SCGB community and beyond.

Antagonistic inhibitory subnetworks control cooperation and competition across cortical space

Daniel P. Mossing, Julia Veit, Agostina Palmigiano, Kenneth D. Miller, and Hillel Adesnik

bioRxiv posted 31 March 2021

[Abstract] [PDF]

 

Neural basis of functional ultrasound signals

Anwar O Nunez-Elizalde, Michael Krumin, Charu Bai Reddy, Gabriel Montaldo, Alan Urban, Kenneth D Harris, and Matteo Carandini

bioRxiv posted 31 March 2021

[Abstract] [PDF]

 

Attention improves information flow between neuronal populations without changing the communication subspace

Ramanujan Srinath, Douglas A Ruff, and Marlene R Cohen

bioRxiv posted 31 March 2021

[Abstract] [PDF]

 

DataJoint Elements: Data Workflows for Neurophysiology

Dimitri Yatsenko, Thinh Nguyen, Shan Shen, Kabilar Gunalan, Christopher A. Turner, Raphael Guzman, Maho Sasaki, Daniel Sitonic, Jacob Reimer, Edgar Y. Walker, and Andreas Tolias

bioRxiv posted 30 March 2021

[Abstract] [PDF]

 

Dynamical processing of orientation precision in the primary visual cortex

Hugo J Ladret, Nelson Cortes, Lamyae Ikan, Frédéric Chavane, Christian Casanova, and Laurent U. Perrinet

bioRxiv posted 30 March 2021

[Abstract] [PDF]

 

Attentional dynamics of efficient codes

Wiktor F Mlynarski and Gasper Tkacik

bioRxiv posted 30 March 2021

[Abstract] [PDF]

 

Large-scale neural recordings call for new insights to link brain and behavior

Anne E Urai, Brent Doiron, Andrew M Leifer, and Anne K Churchland

arXiv posted 26 March 2021

[Abstract] [PDF]

 

Dynamic distortion of the orientation representational space after learning in the mouse primary visual cortex

Julien Corbo, John P McClure, Jr., Orhan Batuhan Erkat, and Pierre-Olivier Polack

bioRxiv posted 26 March 2021

[Abstract] [PDF]

 

A State Space Modeling Approach to Real-Time Phase Estimation

Anirudh Wodeyar, Mark Schatza, Alik S Widge, Uri T Eden, and Mark A Kramer

bioRxiv posted 25 March 2021

[Abstract] [PDF]

 

Fast and statistically robust cell extraction from large-scale neural calcium imaging datasets

Hakan Inan, Claudia Schmuckermair, Tugce Tasci, Biafra Ahanonu, Oscar Hernandez, Jerome Lecoq, Fatih Dinc, Mark J Wagner, Murat Erdogdu, and Mark J Schnitzer

bioRxiv posted 25 March 2021

[Abstract] [PDF]

 

Mechanosensory input shapes Drosophila motor behavior through Patterned Spontaneous Network Activity

Arnaldo Carreira-Rosario, Ryan A York, Minseung Choi, Chris Q Doe, and Thomas R Clandinin

bioRxiv posted 22 March 2021

[Abstract] [PDF]

 

The Geometry of Concept Learning

Ben Sorscher, Surya Ganguli, and Haim Sompolinsky

bioRxiv posted 21 March 2021

[Abstract] [PDF]

 

An optimal population code for global motion estimation in local direction-selective cells

Miriam Henning, Giordano Ramos-Traslosheros, Burak Gür, and Marion Silies

bioRxiv posted 17 March 2021

[Abstract] [PDF]

 

Encoding innate ability through a genomic bottleneck

Alexei Koulakov, Sergey Shuvaev, and Anthony Zador

bioRxiv posted 16 March 2021

[Abstract] [PDF]

 

Changing in the hierarchical organization of local information dynamics during motor decision in the premotor cortex of primates

Giampiero Bardella, Franco Giarrocco, Marta Andujar, Emiliano Brunamonti, Pierpaolo Pani, and Stefano Ferraina

bioRxiv posted 16 March 2021

[Abstract] [PDF]

 

The Neurodata Without Borders ecosystem for neurophysiological data science

Oliver Ruebel, Andrew J. Tritt, Ryan Ly, Benjamin K. Dichter, Satrajit S Ghosh, Lawrence Niu, Ivan Soltesz, Karel Svoboda, Loren M Frank, and Kristofer Bouchard

bioRxiv posted 15 March 2021

[Abstract] [PDF]

 

Direct Extraction of Signal and Noise Correlations from Two-Photon Calcium Imaging of Ensemble Neuronal Activity

Anuththara Rupasinghe, Nikolas Francis, Ji Liu, Zac Bowen, Patrick O. Kanold, and Behtash Babadi

bioRxiv posted 12 March 2021

[Abstract] [PDF]

 

The geometry of face memory

Liang She, Marcus K Benna, Yuelin Shi, Stefano Fusi, and Doris Y Tsao

bioRxiv posted 12 March 2021

[Abstract] [PDF]

 

Towards a More General Understanding of the Algorithmic Utility of Recurrent Connections

Brett W. Larsen and Shaul Druckmann

bioRxiv posted 12 March 2021

[Abstract] [PDF]

 

A rapid and efficient learning rule for biological neural circuits

Eren Sezener, Agnieszka Grabska-Barwinska, Dimitar Kostadinov, Maxime Beau, Sanjukta Krishnagopal, David Budden, Marcus Hutter, Joel Veness, Matthew Botvinick, Claudia Clopath, Michael Hausser, and Peter Latham

bioRxiv posted 12 March 2021

[Abstract] [PDF]

 

A precise and adaptive neural mechanism for predictive temporal processing in the frontal cortex

Nicolas Meirhaeghe, Hansem Sohn, and Mehrdad Jazayeri

bioRxiv posted 10 March 2021

[Abstract] [PDF]

 

Hippocampal replay reflects specific past experiences rather than a plan for subsequent choice

Anna K. Gillespie, Daniela A. Astudillo Maya, Eric L. Denovellis, Daniel F. Liu, David B. Kastner, Michael E. Coulter, Demetris K. Roumis, Uri T Eden, and  Loren M Frank,

bioRxiv posted 10 March 2021

[Abstract] [PDF]

 

Parallel inference of hierarchical latent dynamics in two-photon calcium imaging of neuronal populations

Luke Yuri Prince, Shahab Bakhtiari, Colleen J. Gillon, and Blake A Richards

bioRxiv posted 8 March 2021

[Abstract] [PDF]

 

Complementary task representations in hippocampus and prefrontal cortex for generalising the structure of problems

Veronika Samborska, James L Butler, Mark E Walton, Timothy E.J. Behrens, and Thomas Akam

bioRxiv posted 6 March 2021

[Abstract] [PDF]

 

Multi-scale hierarchical neural network models that bridge from single neurons in the primate primary visual cortex to object recognition behavior

Tiago Marques, Martin Schrimpf, and James J DiCarlo

bioRxiv posted 2 March 2021

[Abstract] [PDF]

 

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