From the bioRxiv: A Selection of Recently Posted Papers from SCGB Investigators and Others
Multi-area functional modules mediate feedforward and recurrent processing in visual cortical hierarchy
Xiaoxuan Jia, Joshua H. Siegle, Séverine Durand, Greggory Heller, Tamina Ramirez, and Shawn R. Olsen
bioRxiv posted 31 August 2020
The connectome of the adult Drosophila mushroom body: implications for function
Feng Li, Jack Lindsey, Elizabeth Marin, Nils Otto, Marisa Dreher, Georgia Dempsey, Ildiko Stark, Alexander Shakeel Bates, Markus William Pleijzier, Philipp Schlegel, Aljoscha Nern, Shinya Takemura, Tansy Yang, Audrey Francis, Amalia Braun, Ruchi Parekh, Marta Costa, Louis Scheffer, Yoshinori Aso, Gregory S.X.E. Jefferis, L. F. Abbott, Ashok Litwin-Kumar, Scott Waddell, and Gerald M. Rubin
bioRxiv posted 29 August 2020
Statistical structure of the trial-to-trial timing variability in synfire chains
Dina Obeid, Jacob A Zavatone-Veth, and Cengiz Pehlevan
bioRxiv posted 29 August 2020
Integrating barcoded neuroanatomy with spatial transcriptional profiling reveals cadherin correlates of projections shared across the cortex
Yu-Chi Sun, Xiaoyin Chen, Stephan Fischer, Shaina Lu, Jesse Gillis, and Anthony M Zador
bioRxiv posted 26 August 2020
Manipulation of striatal population dynamics using temperature warps judgment of time
Tiago Monteiro, Filipe S. Rodrigues, Margarida Pexirra, Bruno Filipe Pereira Cruz, Ana I. Goncalves, Pavel E. Rueda-Orozco, and Joseph J. Paton
bioRxiv posted 24 August 2020
Focal Electrical Stimulation of Human Retinal Ganglion Cells
Sasi Madugula, Alex R. Gogliettino, Moosa Zaidi, Gorish Aggarwal, Alexandra Kling, Nishal P. Shah, Ramandeep Vilkhu, Maddy Hays, Huy Nguyan, Victoria Fan, Eric G. Wu, Pawel Hottowy, Alexander Sher, Alan M. Litke, Ruwan A. Silva, and E.J. Chichilnisky
bioRxiv posted 24 August 2020
Deep Graph Pose: a semi-supervised deep graphical model for improved animal pose tracking
Anqi Wu, Estefany Kelly Buchanan, Matthew R Whiteway, Michael Schartner, Guido T Meijer, Jean-Paul Noel, Erica Rodriguez, Claire Everett, Amy Norovich, Evan S Schaffer, Neeli Mishra, C. Daniel Salzman, Dora E Angelaki, The International Brain Laboratory, John P Cunningham and Liam Paninski
bioRxiv posted 22 August 2020
http://biorxiv.org/content/early/2020/08/22/2020.08.20.259705
Interaction between neuronal encoding and population dynamics during categorization task switching in parietal cortex
Krithika Mohan, Oliver Zhu, and David J Freedman
bioRxiv posted 22 August 2020
Distinct temporal difference error signals in dopamine axons in three regions of the striatum in a decision-making task
Iku Kimura, Hideyuki Matsumoto, Naoshige Uchida, and Mitsuko Watabe-Uchida
bioRxiv posted 22 August 2020
Object manifold geometry across the mouse cortical visual hierarchy
Emmanouil Froudarakis, Uri Cohen, Maria Diamantaki, Edgar Y. Walker, Jacob Reimer, Philipp Berens, Haim Sompolinsky, and Andreas S. Tolias
bioRxiv posted 21 August 2020
Local inhibitory control of frontal network metastability underlies the temporal signature of cognitive states
Vincent Fontanier, Matthieu Sarazin, Frederic M Stoll, Bruno Delord, and Emmanuel Procyk
bioRxiv posted 21 August 2020 doi:10.1101/2020.08.20.259192
A neuronal ensemble encoding adaptive choice during sensory conflict
Preeti Sareen, Li Yan McCurdy, and Michael Nitabach
bioRxiv posted 14 August 2020
Learning an efficient place cell map from grid cells using non-negative sparse coding
Yanbo Lian and Anthony N. Burkitt
bioRxiv posted 13 August 2020
Independent population coding of the past and the present in prefrontal cortex during learning
Silvia Maggi and Mark D Humphries
bioRxiv posted 12 August 2020
Metamers of Bayesian computation
Hansem Sohn and Mehrdad Jazayeri
bioRxiv posted 12 August 2020
Estimation of autocorrelation timescales with Approximate Bayesian Computations
Roxana Zeraati, Tatiana A. Engel, and Anna Levina
bioRxiv posted 12 August 2020
Reconciling functional differences in populations of neurons recorded with two-photon imaging and electrophysiology
Joshua H Siegle, Peter Ledochowitsch, Xiaoxuan Jia, Daniel Millman, Gabriel K Ocker, Shiella Caldejon, Linzy Casal, Andrew Cho, Daniel J Denman, Severine Durand, Peter Groblewski, Gregg Heller, India Kato, Sara Kivikas, Jerome Lecoq, Chelsea Nayan, Kiet Ngo, Philip R Nicovich, Kat R North, Tamina K Ramirez, Jackie Swapp, Xana Waughman, Ali Williford, Shawn R Olsen, Christof Koch, Michael A Buice, and Saskia E. J. de Vries
bioRxiv posted 11 August 2020
Brain Connectomes Come of Age
Xiao-Jing Wang, Ulises Pereira, Marcello G.P. Rosa, Henry Kennedy
arXiv posted 10 August 2020
Real-time, low-latency closed-loop feedback using markerless posture tracking
Gary A Kane, Goncalo Lopes, Jonny L. Saunders, Alexander Mathis, and Mackenzie Weygandt Mathis
bioRxiv posted 5 August 2020
Network-centered homeostasis through inhibition maintains hippocampal spatial map and cortical circuit function
Klara Kaleb, Victor Pedrosa, and Claudia Clopath
bioRxiv posted 4 August 2020
Superlinear Precision and Memory in Simple Population Codes
Jimmy H. J. Kim, Ila Fiete, David J. Schwab
arXiv posted 3 August 2020
